5UUY image
Deposition Date 2017-02-17
Release Date 2017-10-04
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5UUY
Title:
Crystal structure of Dioclea lasiocarpa lectin (DLL) complexed with X-MAN
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.88 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dioclea lasiocarpa lectin (DLL)
Chain IDs:A
Chain Length:237
Number of Molecules:1
Biological Source:Dioclea lasiocarpa
Primary Citation
Structural analysis of Dioclea lasiocarpa lectin: A C6 cells apoptosis-inducing protein.
Int. J. Biochem. Cell Biol. 92 79 89 (2017)
PMID: 28939357 DOI: 10.1016/j.biocel.2017.09.014

Abstact

Lectins are multidomain proteins that specifically recognize various carbohydrates. The structural characterization of these molecules is crucial in understanding their function and activity in systems and organisms. Most cancer cells exhibit changes in glycosylation patterns, and lectins may be able to recognize these changes. In this work, Dioclea lasiocarpa seed lectin (DLL) was structurally characterized. The lectin presented a high degree of similarity with other lectins isolated from legumes, presenting a jelly roll motif and a metal-binding site stabilizing the carbohydrate-recognition domain. DLL demonstrated differential interactions with carbohydrates, depending on type of glycosidic linkage present in ligands. As observed by the reduction of cell viability in C6 cells, DLL showed strong antiglioma activity by mechanisms involving activation of caspase 3.

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Primary Citation of related structures