5URX image
Deposition Date 2017-02-13
Release Date 2017-05-10
Last Version Date 2024-03-13
Entry Detail
PDB ID:
5URX
Title:
Structure of the contracted type VI secretion system sheath in Myxococcus xanthus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
28.00 Å
Aggregation State:
CELL
Reconstruction Method:
SUBTOMOGRAM AVERAGING
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TssB
Gene (Uniprot):MXAN_4807
Chain IDs:A (auth: 1A), C (auth: 1C), E (auth: 1E), G (auth: 1G), I (auth: 1I), K (auth: 1K), M (auth: 2A), O (auth: 2C), Q (auth: 2E), S (auth: 2G), U (auth: 2I), W (auth: 2K), Y (auth: 3A), AA (auth: 3C), CA (auth: 3E), EA (auth: 3G), GA (auth: 3I), IA (auth: 3K)
Chain Length:164
Number of Molecules:18
Biological Source:Myxococcus xanthus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TssC
Gene (Uniprot):MXAN_4808
Chain IDs:B (auth: 1B), D (auth: 1D), F (auth: 1F), H (auth: 1H), J (auth: 1J), L (auth: 1L), N (auth: 2B), P (auth: 2D), R (auth: 2F), T (auth: 2H), V (auth: 2J), X (auth: 2L), Z (auth: 3B), BA (auth: 3D), DA (auth: 3F), FA (auth: 3H), HA (auth: 3J), JA (auth: 3L)
Chain Length:494
Number of Molecules:18
Biological Source:Myxococcus xanthus
Ligand Molecules
Primary Citation
In vivo structures of an intact type VI secretion system revealed by electron cryotomography.
EMBO Rep. 18 1090 1099 (2017)
PMID: 28487352 DOI: 10.15252/embr.201744072

Abstact

The type VI secretion system (T6SS) is a versatile molecular weapon used by many bacteria against eukaryotic hosts or prokaryotic competitors. It consists of a cytoplasmic bacteriophage tail-like structure anchored in the bacterial cell envelope via a cytoplasmic baseplate and a periplasmic membrane complex. Rapid contraction of the sheath in the bacteriophage tail-like structure propels an inner tube/spike complex through the target cell envelope to deliver effectors. While structures of purified contracted sheath and purified membrane complex have been solved, because sheaths contract upon cell lysis and purification, no structure is available for the extended sheath. Structural information about the baseplate is also lacking. Here, we use electron cryotomography to directly visualize intact T6SS structures inside Myxococcus xanthus cells. Using sub-tomogram averaging, we resolve the structure of the extended sheath and membrane-associated components including the baseplate. Moreover, we identify novel extracellular bacteriophage tail fiber-like antennae. These results provide new structural insights into how the extended sheath prevents premature disassembly and how this sophisticated machine may recognize targets.

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Primary Citation of related structures