5URO image
Deposition Date 2017-02-11
Release Date 2017-05-31
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5URO
Keywords:
Title:
Structure of a soluble epoxide hydrolase identified in Trichoderma reesei
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Predicted protein
Gene (Uniprot):TRIREDRAFT_53220
Chain IDs:A
Chain Length:336
Number of Molecules:1
Biological Source:Hypocrea jecorina (strain QM6a)
Ligand Molecules
Primary Citation
Structure of a soluble epoxide hydrolase identified in Trichoderma reesei.
Biochim. Biophys. Acta 1865 1039 1045 (2017)
PMID: 28502798 DOI: 10.1016/j.bbapap.2017.05.004

Abstact

Epoxide hydrolases (EHs) are enzymes that have high biotechnological interest for the fine and transformation industry. Several of these enzymes have enantioselectivity, which allows their application in the separation of enantiomeric mixtures of epoxide substrates. Although two different families of EHs have been described, those that have the α/β-hidrolase fold are the most explored for biotechnological purpose. These enzymes are functionally very well studied, but only few members have three-dimensional structures characterised. Recently, a new EH from the filamentous fungi Trichoderma reseei (TrEH) has been discovered and functionally studied. This enzyme does not have high homology to any other EH structure and have an enatiopreference for (S)-(-) isomers. Herein we described the crystallographic structure of TrEH at 1.7Å resolution, which reveals features of its tertiary structure and active site. TrEH has a similar fold to the other soluble epoxide hydrolases and has the two characteristic hydrolase and cap domains. The enzyme is predominantly monomeric in solution and has also been crystallised as a monomer in the asymmetric unit. Although the catalytic residues are conserved, several other residues of the catalytic groove are not, and might be involved in the specificity for substrates and in the enantioselectivy of this enzyme. In addition, the determination of the crystallographic structure of TrEH might contribute to the rational site direct mutagenesis to generate an even more stable enzyme with higher efficiency to be used in biotechnological purposes.

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Primary Citation of related structures