5UP9 image
Entry Detail
PDB ID:
5UP9
Keywords:
Title:
Crystal Structure of Zn-bound Human Heavy-Chain ferritin variant 122H-delta C-star with para-xylenedihydroxamate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-02-01
Release Date:
2017-09-27
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ferritin heavy chain
Chain IDs:A, B, C, D, E, F
Chain Length:182
Number of Molecules:6
Biological Source:Homo sapiens
Primary Citation
Synthetic Modularity of Protein-Metal-Organic Frameworks.
J. Am. Chem. Soc. 139 8160 8166 (2017)
PMID: 28590729 DOI: 10.1021/jacs.7b01202

Abstact

Previously, we adopted the construction principles of metal-organic frameworks (MOFs) to design a 3D crystalline protein lattice in which pseudospherical ferritin nodes decorated on their C3 symmetric vertices with Zn coordination sites were connected via a ditopic benzene-dihydroxamate linker. In this work, we have systematically varied both the metal ions presented at the vertices of the ferritin nodes (Zn(II), Ni(II), and Co(II)) and the synthetic dihydroxamate linkers, which yielded an expanded library of 15 ferritin-MOFs with the expected body-centered (cubic or tetragonal) lattice arrangements. Crystallographic and small-angle X-ray scattering (SAXS) analyses indicate that lattice symmetries and dimensions of ferritin-MOFs can be dictated by both the metal and linker components. SAXS measurements on bulk crystalline samples reveal that some ferritin-MOFs can adopt multiple lattice conformations, suggesting dynamic behavior. This work establishes that the self-assembly of ferritin-MOFs is highly robust and that the synthetic modularity that underlies the structural diversity of conventional MOFs can also be applied to the self-assembly of protein-based crystalline materials.

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