5UMZ image
Deposition Date 2017-01-30
Release Date 2017-12-27
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5UMZ
Title:
Structure of TNRC6A NLS in complex with importin-alpha
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Importin subunit alpha-1
Gene (Uniprot):Kpna2
Chain IDs:A (auth: B)
Chain Length:509
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TNRC6A
Chain IDs:B (auth: E), C (auth: D)
Chain Length:13
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural characterisation of TNRC6A nuclear localisation signal in complex with importin-alpha.
PLoS ONE 12 e0183587 e0183587 (2017)
PMID: 28837617 DOI: 10.1371/journal.pone.0183587

Abstact

The GW182/TNRC6 family of proteins are central scaffolds that link microRNA-associated Argonaute proteins to the cytoplasmic decay machinery for targeted mRNA degradation processes. Although nuclear roles for the GW182/TNRC6 proteins are unknown, recent reports have demonstrated nucleocytoplasmic shuttling activity that utilises the importin-α and importin-β transport receptors for nuclear translocation. Here we describe the structure of mouse importin-α in complex with the TNRC6A nuclear localisation signal peptide. We further show that the interactions observed between TNRC6A and importin-α are conserved between mouse and human complexes. Our results highlight the ability of monopartite cNLS sequences to maximise contacts at the importin-α major binding site, as well as regions outside the main binding cavities.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback