5ULP image
Deposition Date 2017-01-25
Release Date 2017-05-17
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5ULP
Keywords:
Title:
Structure of the NS5 methyltransferase from Zika bound to MS2042
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.55 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MRNA cap 0-1 NS5-type methyltransferase
Chain IDs:A, B
Chain Length:268
Number of Molecules:2
Biological Source:Zika virus (strain Mr 766)
Primary Citation
Development of a S-adenosylmethionine analog that intrudes the RNA-cap binding site of Zika methyltransferase.
Sci Rep 7 1632 1632 (2017)
PMID: 28487506 DOI: 10.1038/s41598-017-01756-7

Abstact

The Zika virus (ZIKV) has emerged as a major health hazard. We present here a high resolution structure (1.55 Å) of ZIKV NS5 methyltransferase bound to a novel S-adenosylmethionine (SAM) analog in which a 4-fluorophenyl moiety substitutes for the methyl group. We show that the 4-fluorophenyl moiety extends into a portion of the RNA binding tunnel that typically contains the adenosine 2'OH of the RNA-cap moiety. Together, the new SAM analog and the high-resolution crystal structure are a step towards the development of antivirals against ZIKV and other flaviviruses.

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Primary Citation of related structures
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