5UJR image
Entry Detail
PDB ID:
5UJR
Title:
NMR Solution Structure of the Two-component Bacteriocin CbnXY
Biological Source:
PDB Version:
Deposition Date:
2017-01-18
Release Date:
2017-11-29
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Bacteriocin
Chain IDs:A
Chain Length:33
Number of Molecules:1
Biological Source:Carnobacterium maltaromaticum
Ligand Molecules
Primary Citation
Identification and three-dimensional structure of carnobacteriocin XY, a class IIb bacteriocin produced by Carnobacteria.
FEBS Lett. 591 1349 1359 (2017)
PMID: 28391617 DOI: 10.1002/1873-3468.12648

Abstact

In this study, we report that CbnX (33 residues) and CbnY (29 residues) comprise a class IIb (two-component) bacteriocin in Carnobacteria. Individually, CbnX and CbnY are inactive, but together act synergistically to exert a narrow spectrum of activity. The structures of CbnX and CbnY in structure-inducing conditions were determined and strongly resemble other class IIb bacteriocins (i.e., LcnG, PlnEF, PlnJK). CbnX has an extended, amphipathic α-helix and a flexible C terminus. CbnY has two α-helices (one hydrophobic, one amphipathic) connected by a short loop and a cationic C terminus. CbnX and CbnY do not appear to interact directly and likely require a membrane-bound receptor to facilitate formation of the bacteriocin complex. This is the first class IIb bacteriocin reported for Carnobacteria.

Legend

Protein

Chemical

Disease

Primary Citation of related structures