5UE5 image
Entry Detail
PDB ID:
5UE5
Keywords:
Title:
proMMP-7 with heparin octasaccharide bound to the catalytic domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-12-29
Release Date:
2017-07-19
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
16
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Matrilysin
Mutations:E195A
Chain IDs:A
Chain Length:247
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Glycan Activation of a Sheddase: Electrostatic Recognition between Heparin and proMMP-7.
Structure 25 1100 1110.e5 (2017)
PMID: 28648610 DOI: 10.1016/j.str.2017.05.019

Abstact

Heparan sulfate proteoglycans activate the matrix metalloproteinase-7 zymogen (proMMP-7) and recruit it in order to shed proteins from cell surfaces. This occurs in uterine and mammary epithelia, bacterial killing, lung healing, and tumor cell signaling. Basic tracks on proMMP-7 recognize polyanionic heparin, according to nuclear magnetic resonance and mutations disruptive of maturation. Contacts and proximity measurements guided docking of a heparin octasaccharide to proMMP-7. The reducing end fits into a basic pocket in the pro-domain while the chain continues toward the catalytic domain. Another oligosaccharide traverses a basic swath remote on the catalytic domain and inserts its reducing end into a slot formed with the basic C terminus. This latter association appears to support allosteric acceleration of proteolysis. The modes of binding account for extended, heterogeneous assemblies of proMMP-7 with heparinoids during maturation and for bridging to pro-α-defensins and proteoglycans. These associations support proteolytic release of activities at epithelial cell surfaces.

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