ISDA

Deposition Date 2016-12-06

Release Date 2018-03-14

Last Version Date 2023-11-15

Entry Detail

PDB ID:

5U5F

Keywords:

IMMUNE SYSTEM

Title:

MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Finegoldia magna (Taxon ID: 1260)
Staphylococcus aureus (Taxon ID: 1280)
synthetic construct (Taxon ID: 32630)

Host Organism:

Cricetulus griseus

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.81 Å

R-Value Free:

0.19

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:MEMAB TRASTUZUMAB FAB LIGHT CHAIN I83E
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:MEMAB TRASTUZUMAB FAB HEAVY CHAIN
Chain IDs:B
Chain Length:223
Number of Molecules:1
Biological Source:Homo sapiens

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Immunoglobulin G binding protein A
Mutagens:YES
Chain IDs:E (auth: C)
Chain Length:54
Number of Molecules:1
Biological Source:Staphylococcus aureus

UniProt ID:P02976 Pfam ID:PF02216

Polymer Type:polypeptide(L)
Molecule:5-DIPHENYL LONG MEDITOPE
Chain IDs:D
Chain Length:17
Number of Molecules:1
Biological Source:synthetic construct

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein L
Mutagens:YES
Chain IDs:C (auth: E)
Chain Length:65
Number of Molecules:1
Biological Source:Finegoldia magna

UniProt ID:Q51918 Pfam ID:PF02246

Ligand Molecules

MRY

Primary Citation

Meditope Enabled Trastuzumab I83E Variant In Complex With (Ac)Cqfda(Ph)2Strrlrcggsk

Bzymek, K.P, Avery, K.N, Zer, C, Williams, J.C.Show

To Be Published ? ? ? (?)

Primary Citation of related structures