5TSG image
Deposition Date 2016-10-28
Release Date 2017-05-17
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5TSG
Title:
PilB from Geobacter metallireducens bound to ADP
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.28
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Type IV pilus biogenesis ATPase PilB
Gene (Uniprot):pilB
Chain IDs:A (auth: B), B (auth: C), C (auth: D)
Chain Length:588
Number of Molecules:3
Biological Source:Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Primary Citation
The molecular mechanism of the type IVa pilus motors.
Nat Commun 8 15091 15091 (2017)
PMID: 28474682 DOI: 10.1038/ncomms15091

Abstact

Type IVa pili are protein filaments essential for virulence in many bacterial pathogens; they extend and retract from the surface of bacterial cells to pull the bacteria forward. The motor ATPase PilB powers pilus assembly. Here we report the structures of the core ATPase domains of Geobacter metallireducens PilB bound to ADP and the non-hydrolysable ATP analogue, AMP-PNP, at 3.4 and 2.3 Å resolution, respectively. These structures reveal important differences in nucleotide binding between chains. Analysis of these differences reveals the sequential turnover of nucleotide, and the corresponding domain movements. Our data suggest a clockwise rotation of the central sub-pores of PilB, which through interactions with PilC, would support the assembly of a right-handed helical pilus. Our analysis also suggests a counterclockwise rotation of the C2 symmetric PilT that would enable right-handed pilus disassembly. The proposed model provides insight into how this family of ATPases can power pilus extension and retraction.

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Primary Citation of related structures