ISDA

Deposition Date 2016-10-25

Release Date 2017-11-01

Last Version Date 2024-10-23

Entry Detail

PDB ID:

5TR4

Keywords:

LIGASE/LIGASE INHIBITOR

Title:

Structure of Ubiquitin activating enzyme (Uba1) in complex with ubiquitin and TAK-243

Biological Source:

Source Organism:

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Taxon ID: 559292)
Bos taurus (Taxon ID: 9913)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.20 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 21 21 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ubiquitin-activating enzyme E1 1
Gene (Uniprot):UBA1
Mutations:N471M, K519R
Chain IDs:A, C
Chain Length:1017
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt ID:P22515 Pfam ID:PF00899, PF16190, PF16191, PF10585, PF09358 EC:6.2.1.45

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ubiquitin
Gene (Uniprot):UBB
Chain IDs:B, D
Chain Length:76
Number of Molecules:2
Biological Source:Bos taurus

UniProt ID:P0CG53 Pfam ID:PF00240

Ligand Molecules

61T

Primary Citation

Identification and Characterization of a Small Molecule Inhibitor of the Ubiquitin Activating Enzyme (TAK-243)

Hyer, M, Milhollen, M, Ciavarri, J, Fleming, P, Traore, T, Sappal, D, Huck, J, Shi, J, Gavin, J, Brownell, J, Yang, Y, Stringer, B, Griffin, R, Bruzzese, F, Soucy, T, Duffy, J, Rabino, C, Riceberg, J, Hoar, K, Lublinsky, A, Menon, S, Sintchak, M, Bump, N, Pulukuri, S, Amidon, B, Langston, S, Tirrell, S, Kuranda, M, Veiby, P, Newcomb, J, Li, P, Wu, J, Dick, L, Greenspan, P, Galvin, K, Manfredi, M, Claibrone, C, Bence, N.Show

To be published ? ? ? (?)

Primary Citation of related structures