ISDA: 5TQE

Deposition Date 2016-10-24

Release Date 2017-02-01

Last Version Date 2024-10-23

Entry Detail

PDB ID:

5TQE

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

Factor VIIa in complex with the inhibitor (5R)-5-[(1-aminoisoquinolin-6-yl)amino]-19-(cyclopropylsulfonyl)-3-methyl-13-oxa-3,15-diazatricyclo[14.3.1.1~6,10~]henicosa-1(20),6(21),7,9,16,18-hexaene-4,14-dione

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Cricetinae

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.20

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 41 21 2

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Factor VIIa (Heavy Chain)
Gene (Uniprot):F7
Chain IDs:A (auth: H)
Chain Length:254
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P08709 Pfam ID:PF00089, PF14670 EC:3.4.21.21

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Factor VIIa (Light Chain)
Gene (Uniprot):F7
Chain IDs:B (auth: L)
Chain Length:55
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P08709 Pfam ID:PF00089, PF14670 EC:3.4.21.21

Ligand Molecules

7KQ

GOL

SO4

Primary Citation

Design and Synthesis of Novel Meta-Linked Phenylglycine Macrocyclic FVIIa Inhibitors.

Richter, J.M, Cheney, D.L, Bates, J.A, Wei, A, Luettgen, J.M, Rendina, A.R, Harper, T.M, Narayanan, R, Wong, P.C, Seiffert, D, Wexler, R.R, Priestley, E.S.Show

ACS Med Chem Lett 8 67 72 (2017)

PMID: 28105277 DOI: 10.1021/acsmedchemlett.6b00375

Abstact

Two novel series of meta-linked phenylglycine-based macrocyclic FVIIa inhibitors have been designed to improve the rodent metabolic stability and PK observed with the precursor para-linked phenylglycine macrocycles. Through iterative structure-based design and optimization, the TF/FVIIa Ki was improved to subnanomolar levels with good clotting activity, metabolic stability, and permeability.

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Primary Citation of related structures

Abstact

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