5TJR image
Deposition Date 2016-10-05
Release Date 2017-01-11
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5TJR
Keywords:
Title:
X-ray Crystal structure of a methylmalonate semialdehyde dehydrogenase from Pseudomonas sp. AAC
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methylmalonate-semialdehyde dehydrogenase
Chain IDs:A, B, C, D, E, F
Chain Length:531
Number of Molecules:6
Biological Source:Pseudomonas sp. AAC
Ligand Molecules
Primary Citation
Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida.
Biochemistry 55 6595 6598 (2016)
PMID: 27933790 DOI: 10.1021/acs.biochem.6b00963

Abstact

The first structure of nicotine oxidoreductase (NicA2) was determined by X-ray crystallography. Pseudomonas putida has evolved nicotine-degrading activity to provide a source of carbon and nitrogen. The structure establishes NicA2 as a member of the monoamine oxidase family. Residues 1-50 are disordered and may play a role in localization. The nicotine-binding site proximal to the isoalloxazine ring of flavin shows an unusual composition of the classical aromatic cage (W427 and N462). The active site architecture is consistent with the proposed binding of the deprotonated form of the substrate and the flavin-dependent oxidation of the pyrrolidone C-N bond followed by nonenzymatic hydrolysis.

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Primary Citation of related structures