5TIL image
Deposition Date 2016-10-03
Release Date 2017-11-01
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5TIL
Keywords:
IMMUNE SYSTEM
Title:
Murine class I major histocompatibility complex H-2 Db in complex with LCMV-derived GP33 altered peptide V3P and T-cell receptor P14
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Lymphocytic choriomeningitis mammarenavirus (Taxon ID: 11623)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.83 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 21 21 21
5TIL validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:H-2 class I histocompatibility antigen, D-B alpha chain
Gene (Uniprot):H2-D1
Chain IDs:A, D
Chain Length:276
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P01899 Pfam ID:PF00129, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2m
Chain IDs:B, E
Chain Length:99
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P01887 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pre-glycoprotein polyprotein GP complex
Gene (Uniprot):GPC
Mutations:Val35Pro, Cys41Met
Chain IDs:C, F
Chain Length:9
Number of Molecules:2
Biological Source:Lymphocytic choriomeningitis mammarenavirus
UniProt ID:Q9QDK7
Polymer Type:polypeptide(L)
Molecule:alpha chain of P14 T cell receptor
Chain IDs:G
Chain Length:205
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Beta chain of murine T cell receptor P14
Chain IDs:H, J (auth: L)
Chain Length:238
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Alpha chain of murine P14 T cell receptor
Chain IDs:I (auth: K)
Chain Length:160
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Ternary complexes of TCR P14 give insights into the mechanisms behind reestablishment of CTL responses against a viral escape mutant
To be published ? ? ? (?)
Primary Citation of related structures
4NSK