5TED image
Deposition Date 2016-09-21
Release Date 2017-10-18
Last Version Date 2024-04-03
Entry Detail
PDB ID:
5TED
Keywords:
Title:
Effector binding domain of QuiR in complex with shikimate
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.89 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lmo0488 protein
Gene (Uniprot):lmo0488
Chain IDs:A (auth: B), B (auth: A)
Chain Length:226
Number of Molecules:2
Biological Source:Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Polymer Type:polypeptide(L)
Molecule:His Tag peptide
Chain IDs:C (auth: H)
Chain Length:9
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Shikimate Induced Transcriptional Activation of Protocatechuate Biosynthesis Genes by QuiR, a LysR-Type Transcriptional Regulator, in Listeria monocytogenes.
J. Mol. Biol. 430 1265 1283 (2018)
PMID: 29530613 DOI: 10.1016/j.jmb.2018.03.003

Abstact

Listeria monocytogenes is a common foodborne bacterial pathogen that contaminates plant and animal consumable products. The persistent nature of L. monocytogenes is associated with millions of dollars in food recalls annually. Here, we describe the role of shikimate in directly modulating the expression of genes encoding enzymes for the conversion of quinate and shikimate metabolites to protocatechuate. In L. monocytogenes, these genes are found within two operons, named qui1 and qui2. In addition, a gene named quiR, encoding a LysR-Type Transcriptional Regulator (QuiR), is located immediately upstream of the qui1 operon. Transcriptional lacZ-promoter fusion experiments show that QuiR induces gene expression of both qui1 and qui2 operons in the presence of shikimate. Furthermore, co-crystallization of the QuiR effector binding domain in complex with shikimate provides insights into the mechanism of activation of this regulator. Together these data show that upon shikimate accumulation, QuiR activates the transcription of genes encoding enzymes involved in shikimate and quinate utilization for the production of protocatechuate. Furthermore, the accumulation of protocatechuate leads to the inhibition of Listeria growth. Since protocatechuate is not known to be utilized by Listeria, its role is distinct from those established in other bacteria.

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Primary Citation of related structures