5SZJ image
Deposition Date 2016-08-14
Release Date 2016-08-24
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5SZJ
Keywords:
Title:
Structure of human Rab10 in complex with the bMERB domain of Mical-cL
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.66 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ras-related protein Rab-10
Gene (Uniprot):RAB10
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:MICAL C-terminal-like protein
Chain IDs:B
Chain Length:153
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
bMERB domains are bivalent Rab8 family effectors evolved by gene duplication.
Elife 5 ? ? (2016)
PMID: 27552051 DOI: 10.7554/eLife.18675

Abstact

In their active GTP-bound form, Rab proteins interact with proteins termed effector molecules. In this study, we have thoroughly characterized a Rab effector domain that is present in proteins of the Mical and EHBP families, both known to act in endosomal trafficking. Within our study, we show that these effectors display a preference for Rab8 family proteins (Rab8, 10, 13 and 15) and that some of the effector domains can bind two Rab proteins via separate binding sites. Structural analysis allowed us to explain the specificity towards Rab8 family members and the presence of two similar Rab binding sites that must have evolved via gene duplication. This study is the first to thoroughly characterize a Rab effector protein that contains two separate Rab binding sites within a single domain, allowing Micals and EHBPs to bind two Rabs simultaneously, thus suggesting previously unknown functions of these effector molecules in endosomal trafficking.

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