5SYK image
Entry Detail
PDB ID:
5SYK
Keywords:
Title:
Crystal structure of B. pseudomallei KatG treated with hydrogen peroxide
Biological Source:
PDB Version:
Deposition Date:
2016-08-11
Release Date:
2016-09-21
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Catalase-peroxidase
Chain IDs:A, B
Chain Length:728
Number of Molecules:2
Biological Source:Burkholderia pseudomallei (strain 1710b)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TOX A TRP modified residue
Primary Citation
An ionizable active-site tryptophan imparts catalase activity to a peroxidase core.
J. Am. Chem. Soc. 136 7249 7252 (2014)
PMID: 24785434 DOI: 10.1021/ja502794e

Abstact

Catalase peroxidases (KatG's) are bifunctional heme proteins that can disproportionate hydrogen peroxide (catalatic reaction) despite their structural dissimilarity with monofunctional catalases. Using X-ray crystallography and QM/MM calculations, we demonstrate that the catalatic reaction of KatG's involves deprotonation of the active-site Trp, which plays a role similar to that of the distal His in monofunctional catalases. The interaction of a nearby mobile arginine with the distal Met-Tyr-Trp essential adduct (in/out) acts as an electronic switch, triggering deprotonation of the adduct Trp.

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Primary Citation of related structures