5SVZ image
Deposition Date 2016-08-08
Release Date 2016-08-31
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5SVZ
Title:
HIV-1 Tat NLS in complex with importin alpha
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Importin subunit alpha-1
Gene (Uniprot):Kpna2
Chain IDs:A
Chain Length:510
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tat
Chain IDs:B
Chain Length:15
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1
Primary Citation
Structural Basis for Importin-alpha Binding of the Human Immunodeficiency Virus Tat.
Sci Rep 7 1650 1650 (2017)
PMID: 28490747 DOI: 10.1038/s41598-017-01853-7

Abstact

HIV-1 has caused 35 million deaths globally, and approximately the same number is currently living with HIV-1. The trans-activator of transcription (Tat) protein of HIV-1 plays an important regulatory function in the virus life cycle, responsible for regulating the reverse transcription of the viral genome RNA. Tat is found in the nucleus of infected cells, but can also invade uninfected neighbouring cells. Regions within Tat responsible for these cellular localisations are overlapping and include a nuclear localisation signal (NLS) spanning 48GRKKRR, and a cell penetrating peptide (CPP) signal spanning 48GRKKRRQRRRAPQN. However, the mechanism by which this NLS/CPP region mediates interaction with the nuclear import receptors remains to be resolved structurally. Here, we establish that the HIV-1 Tat:NLS/CPP is able to form a stable and direct interaction with the classical nuclear import receptor importin-α and using x-ray crystallography, we have determined the molecular interface and binding determinants to a resolution of 2.0 Å. We show for the first time that the interface is the same as host factors such as Ku70 and Ku80, rather than other virus proteins such as Ebola VP24 that bind on the outer surface of importin-α.

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Primary Citation of related structures
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