5SVG image
Deposition Date 2016-08-05
Release Date 2017-03-08
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5SVG
Title:
Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Adagio protein 1
Gene (Uniprot):ADO1
Chain IDs:A (auth: B), B (auth: A), C, D
Chain Length:137
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife 6 ? ? (2017)
PMID: 28244872 DOI: 10.7554/eLife.21646

Abstact

A LOV (Light, Oxygen, or Voltage) domain containing blue-light photoreceptor ZEITLUPE (ZTL) directs circadian timing by degrading clock proteins in plants. Functions hinge upon allosteric differences coupled to the ZTL photocycle; however, structural and kinetic information was unavailable. Herein, we tune the ZTL photocycle over two orders of magnitude. These variants reveal that ZTL complexes with targets independent of light, but dictates enhanced protein degradation in the dark. In vivo experiments definitively show photocycle kinetics dictate the rate of clock component degradation, thereby impacting circadian period. Structural studies demonstrate that photocycle dependent activation of ZTL depends on an unusual dark-state conformation of ZTL. Crystal structures of ZTL LOV domain confirm delineation of structural and kinetic mechanisms and identify an evolutionarily selected allosteric hinge differentiating modes of PAS/LOV signal transduction. The combined biochemical, genetic and structural studies provide new mechanisms indicating how PAS/LOV proteins integrate environmental variables in complex networks.

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Primary Citation of related structures