ISDA

Deposition Date 2022-01-20

Release Date 2022-02-09

Last Version Date 2024-10-23

Entry Detail

PDB ID:

5SDM

Keywords:

HYDROLASE

Title:

PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z1328078283

Biological Source:

Source Organism:

Porphyromonas gingivalis (Taxon ID: 837)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.04 Å

R-Value Free:

0.25

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Asp/Glu-specific dipeptidyl-peptidase
Gene (Uniprot):dpp11
Chain IDs:A, B
Chain Length:707
Number of Molecules:2
Biological Source:Porphyromonas gingivalis

UniProt ID:B2RID1 Pfam ID:PF10459

Ligand Molecules

I8A

Primary Citation

PanDDA analysis group deposition

Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A.Show

To Be Published ? ? ? (?)

Primary Citation of related structures