5OUK image
Entry Detail
PDB ID:
5OUK
Keywords:
Title:
Crystal structure of human AKR1B1 complexed with NADP+ and compound 41
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-08-24
Release Date:
2018-05-09
Method Details:
Experimental Method:
Resolution:
0.96 Å
R-Value Free:
0.14
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Aldose reductase
Chain IDs:A
Chain Length:316
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Design, synthesis, structure-activity relationships and X-ray structural studies of novel 1-oxopyrimido[4,5-c]quinoline-2-acetic acid derivatives as selective and potent inhibitors of human aldose reductase.
Eur J Med Chem 152 160 174 (2018)
PMID: 29705708 DOI: 10.1016/j.ejmech.2018.04.015

Abstact

Human aldose reductase (AKR1B1, AR) is a key enzyme of the polyol pathway, catalyzing the reduction of glucose to sorbitol at high glucose concentrations, as those found in diabetic condition. Indeed, AKR1B1 overexpression is related to diabetes secondary complications and, in some cases, with cancer. For many years, research has been focused on finding new AKR1B1 inhibitors (ARIs) to overcome these diseases. Despite the efforts, most of the new drug candidates failed because of their poor pharmacokinetic properties and/or unacceptable side effects. Here we report the synthesis of a series of 1-oxopyrimido[4,5-c]quinoline-2-acetic acid derivatives as novel ARIs. IC50 assays and X-ray crystallographic studies proved that these compounds are promising hits for further drug development, with high potency and selectivity against AKR1B1. Based on the determined X-ray structures with hit-to-lead compounds, we designed and synthesized a second series that yielded lead compound 68 (Kiappvs. AKR1B1 = 73 nM). These compounds are related to the previously reported 2-aminopyrimido[4,5-c]quinolin-1(2H)-ones, which exhibit antimitotic activity. Regardless of their similarity, the 2-amino compounds are unable to inhibit AKR1B1 while the 2-acetic acid derivatives are not cytotoxic against fibrosarcoma HT-1080 cells. Thus, the replacement of the amino group by an acetic acid moiety changes their biological activity, improving their potency as ARIs.

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