5OQ3 image
Deposition Date 2017-08-10
Release Date 2017-11-01
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5OQ3
Keywords:
Title:
High resolution structure of the functional region of Cwp19 from Clostridium difficile
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cwp19
Gene (Uniprot):cwp19
Chain IDs:A
Chain Length:396
Number of Molecules:1
Biological Source:Clostridioides difficile
Primary Citation
The molecular structure of the glycoside hydrolase domain of Cwp19 from Clostridium difficile.
FEBS J. 284 4343 4357 (2017)
PMID: 29083543 DOI: 10.1111/febs.14310

Abstact

UNLABELLED Clostridium difficile is a burden to healthcare systems around the world, causing tens of thousands of deaths annually. The S-layer of the bacterium, a layer of protein found of the surface of cells, has received a significant amount of attention over the past two decades as a potential target to combat the growing threat presented by C. difficile infections. The S-layer contains a wide range of proteins, each of which possesses three cell wall-binding domains, while many also possess a "functional" region. Here, we present the high resolution structure of the functional region of one such protein, Cwp19 along with preliminary functional characterisation of the predicted glycoside hydrolase. Cwp19 has a TIM barrel fold and appears to possess a high degree of substrate selectivity. The protein also exhibits peptidoglycan hydrolase activity, an order of magnitude slower than that of lysozyme and is the first member of glycoside hydrolase-like family 10 to be characterised. This research goes some way to understanding the role of Cwp19 in the S-layer of C. difficile. DATABASE Structural data are available in the PDB under the accession numbers 5OQ2 and 5OQ3.

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