5OQ2 image
Deposition Date 2017-08-10
Release Date 2017-11-01
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5OQ2
Keywords:
Title:
Se-SAD structure of the functional region of Cwp19 from Clostridium difficile
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cwp19
Gene (Uniprot):cwp19
Chain IDs:A, B
Chain Length:396
Number of Molecules:2
Biological Source:Clostridioides difficile
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
The molecular structure of the glycoside hydrolase domain of Cwp19 from Clostridium difficile.
FEBS J. 284 4343 4357 (2017)
PMID: 29083543 DOI: 10.1111/febs.14310

Abstact

UNLABELLED Clostridium difficile is a burden to healthcare systems around the world, causing tens of thousands of deaths annually. The S-layer of the bacterium, a layer of protein found of the surface of cells, has received a significant amount of attention over the past two decades as a potential target to combat the growing threat presented by C. difficile infections. The S-layer contains a wide range of proteins, each of which possesses three cell wall-binding domains, while many also possess a "functional" region. Here, we present the high resolution structure of the functional region of one such protein, Cwp19 along with preliminary functional characterisation of the predicted glycoside hydrolase. Cwp19 has a TIM barrel fold and appears to possess a high degree of substrate selectivity. The protein also exhibits peptidoglycan hydrolase activity, an order of magnitude slower than that of lysozyme and is the first member of glycoside hydrolase-like family 10 to be characterised. This research goes some way to understanding the role of Cwp19 in the S-layer of C. difficile. DATABASE Structural data are available in the PDB under the accession numbers 5OQ2 and 5OQ3.

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Chemical

Disease

Primary Citation of related structures
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