5OMT image
Deposition Date 2017-08-01
Release Date 2017-11-15
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5OMT
Keywords:
Title:
Endonuclease NucB
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NucB
Gene (Uniprot):nucB
Chain IDs:A
Chain Length:110
Number of Molecules:1
Biological Source:Bacillus licheniformis
Primary Citation
Crystal structure of NucB, a biofilm-degrading endonuclease.
Nucleic Acids Res. 46 473 484 (2018)
PMID: 29165717 DOI: 10.1093/nar/gkx1170

Abstact

Bacterial biofilms are a complex architecture of cells that grow on moist interfaces, and are held together by a molecular glue of extracellular proteins, sugars and nucleic acids. Biofilms are particularly problematic in human healthcare as they can coat medical implants and are thus a potential source of disease. The enzymatic dispersal of biofilms is increasingly being developed as a new strategy to treat this problem. Here, we have characterized NucB, a biofilm-dispersing nuclease from a marine strain of Bacillus licheniformis, and present its crystal structure together with the biochemistry and a mutational analysis required to confirm its active site. Taken together, these data support the categorization of NucB into a unique subfamily of the ββα metal-dependent non-specific endonucleases. Understanding the structure and function of NucB will facilitate its future development into an anti-biofilm therapeutic agent.

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Primary Citation of related structures