5OMR image
Entry Detail
PDB ID:
5OMR
Keywords:
Title:
Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with vanillin.
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2017-08-01
Release Date:
2018-07-04
Method Details:
Experimental Method:
Resolution:
1.68 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GcoA
Chain IDs:A
Chain Length:409
Number of Molecules:1
Biological Source:Amycolatopsis sp. ATCC 39116
Primary Citation
A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun 9 2487 2487 (2018)
PMID: 29950589 DOI: 10.1038/s41467-018-04878-2

Abstact

Microbial aromatic catabolism offers a promising approach to convert lignin, a vast source of renewable carbon, into useful products. Aryl-O-demethylation is an essential biochemical reaction to ultimately catabolize coniferyl and sinapyl lignin-derived aromatic compounds, and is often a key bottleneck for both native and engineered bioconversion pathways. Here, we report the comprehensive characterization of a promiscuous P450 aryl-O-demethylase, consisting of a cytochrome P450 protein from the family CYP255A (GcoA) and a three-domain reductase (GcoB) that together represent a new two-component P450 class. Though originally described as converting guaiacol to catechol, we show that this system efficiently demethylates both guaiacol and an unexpectedly wide variety of lignin-relevant monomers. Structural, biochemical, and computational studies of this novel two-component system elucidate the mechanism of its broad substrate specificity, presenting it as a new tool for a critical step in biological lignin conversion.

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