5OJ9 image
Entry Detail
PDB ID:
5OJ9
Keywords:
Title:
Structure of Mb NMH
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-07-21
Release Date:
2018-01-24
Method Details:
Experimental Method:
Resolution:
1.48 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Myoglobin
Chain IDs:A
Chain Length:163
Number of Molecules:1
Biological Source:Physeter catodon
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MHS A HIS modified residue
Ligand Molecules
Primary Citation
A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc. 140 1535 1543 (2018)
PMID: 29309143 DOI: 10.1021/jacs.7b12621

Abstact

Expanding the range of genetically encoded metal coordination environments accessible within tunable protein scaffolds presents excellent opportunities for the creation of metalloenzymes with augmented properties and novel activities. Here, we demonstrate that installation of a noncanonical Nδ-methyl histidine (NMH) as the proximal heme ligand in the oxygen binding protein myoglobin (Mb) leads to substantial increases in heme redox potential and promiscuous peroxidase activity. Structural characterization of this catalytically modified myoglobin variant (Mb NMH) revealed significant changes in the proximal pocket, including alterations to hydrogen-bonding interactions involving the prosthetic porphyrin cofactor. Further optimization of Mb NMH via a combination of rational modification and several rounds of laboratory evolution afforded efficient peroxidase biocatalysts within a globin fold, with activities comparable to those displayed by nature's peroxidases.

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