5OCL image
Deposition Date 2017-07-03
Release Date 2017-07-26
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5OCL
Keywords:
Title:
Nanobody-anti-VGLUT nanobody complex
Biological Source:
Source Organism:
Vicugna pacos (Taxon ID: 30538)
Lama glama (Taxon ID: 9844)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 4 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:anti-llama nanobody
Chain IDs:A, C, F, H
Chain Length:118
Number of Molecules:4
Biological Source:Vicugna pacos
Polymer Type:polypeptide(L)
Molecule:anti-vglut nanobody
Chain IDs:B, D, E, G
Chain Length:127
Number of Molecules:4
Biological Source:Lama glama
Primary Citation
Generation and Characterization of Anti-VGLUT Nanobodies Acting as Inhibitors of Transport.
Biochemistry 56 3962 3971 (2017)
PMID: 28731329 DOI: 10.1021/acs.biochem.7b00436

Abstact

The uptake of glutamate by synaptic vesicles is mediated by vesicular glutamate transporters (VGLUTs). The central role of these transporters in excitatory neurotransmission underpins their importance as pharmacological targets. Although several compounds inhibit VGLUTs, highly specific inhibitors were so far unavailable, thus limiting applications to in vitro experiments. Besides their potential in pharmacology, specific inhibitors would also be beneficial for the elucidation of transport mechanisms. To overcome this shortage, we generated nanobodies (Nbs) by immunization of a llama with purified rat VGLUT1 and subsequent selection of binders from a phage display library. All identified Nbs recognize cytosolic epitopes, and two of the binders greatly reduced the rate of uptake of glutamate by reconstituted liposomes and subcellular fractions enriched with synaptic vesicles. These Nbs can be expressed as functional green fluorescent protein fusion proteins in the cytosol of HEK cells for intracellular applications as immunocytochemical and biochemical agents. The selected binders thus provide valuable tools for cell biology and neuroscience.

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