ISDA

Deposition Date 2017-06-07

Release Date 2018-06-20

Last Version Date 2024-01-17

Entry Detail

PDB ID:

5O6Y

Keywords:

HYDROLASE

Title:

Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide

Biological Source:

Source Organism:

Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) (Taxon ID: 226900)

Host Organism:

Escherichia coli K-12

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.25

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 41 21 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peptidoglycan N-acetylglucosamine deacetylase
Gene (Uniprot):BC_1960
Mutations:Post-translational modification P171PXU in the chains B, C and D
Chain IDs:A
Chain Length:214
Number of Molecules:1
Biological Source:Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)

UniProt ID:Q81EK9 Pfam ID:PF01522 EC:3.5.1.104

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peptidoglycan N-acetylglucosamine deacetylase
Gene (Uniprot):BC_1960
Mutations:post-translational midification of P171 to PXU
Chain IDs:B, C, D
Chain Length:214
Number of Molecules:3
Biological Source:Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)

UniProt ID:Q81EK9 Pfam ID:PF01522 EC:3.5.1.104

Modified Residue