5O4P image
Deposition Date 2017-05-30
Release Date 2017-11-01
Last Version Date 2025-10-01
Entry Detail
PDB ID:
5O4P
Title:
Crystal structure of AMPylated GRP78
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:78 kDa glucose-regulated protein
Gene (Uniprot):HSPA5
Chain IDs:A, B
Chain Length:523
Number of Molecules:2
Biological Source:Cricetulus griseus
Primary Citation
AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation.
Elife 6 ? ? (2017)
PMID: 29064368 DOI: 10.7554/eLife.29428

Abstact

The endoplasmic reticulum (ER)-localized Hsp70 chaperone BiP contributes to protein folding homeostasis by engaging unfolded client proteins in a process that is tightly coupled to ATP binding and hydrolysis. The inverse correlation between BiP AMPylation and the burden of unfolded ER proteins suggests a post-translational mechanism for adjusting BiP's activity to changing levels of ER stress, but the underlying molecular details are unexplored. We present biochemical and crystallographic studies indicating that irrespective of the identity of the bound nucleotide AMPylation biases BiP towards a conformation normally attained by the ATP-bound chaperone. AMPylation does not affect the interaction between BiP and J-protein co-factors but appears to allosterically impair J protein-stimulated ATP-hydrolysis, resulting in the inability of modified BiP to attain high affinity for its substrates. These findings suggest a molecular mechanism by which AMPylation serves as a switch to inactivate BiP, limiting its interactions with substrates whilst conserving ATP.

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Primary Citation of related structures