5NU9 image
Entry Detail
PDB ID:
5NU9
Title:
Structure of human amniotic fluid RBP4 saturated with palmitate
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2017-04-28
Release Date:
2018-03-07
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Retinol-binding protein 4
Chain IDs:A
Chain Length:182
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Human plasma retinol-binding protein (RBP4) is also a fatty acid-binding protein.
Biochim. Biophys. Acta 1863 458 466 (2018)
PMID: 29414511 DOI: 10.1016/j.bbalip.2018.01.010

Abstact

RBP4 (plasma retinol-binding protein) is the 21 kDa transporter of all-trans retinol that circulates in plasma as a moderately tight 1:1 molar complex of the vitamin with the protein. RBP4 is primarily synthesized in the liver but is also produced by adipose tissue and circulates bound to a larger protein, transthyretin, TTR, that serves to increase its molecular mass and thus avoid its elimination by glomerular filtration. This paper reports the high resolution three-dimensional structures of human RBP4 naturally lacking bound retinol purified from plasma, urine and amniotic fluid. In all these crystals we found a fatty acid molecule bound in the hydrophobic ligand-binding site, a result confirmed by mass spectrometry measurements. In addition we also report the 1.5 Å resolution structures of human holo-RBP4 and of the protein saturated with palmitic and lauric acid and discuss the interaction of the fatty acids and retinol with the protein.

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