5NT7 image
Deposition Date 2017-04-27
Release Date 2017-05-17
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5NT7
Title:
Structure of the LOTUS domain of Oskar in complex with the C-terminal RecA-like domain of Vasa
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.40 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maternal effect protein oskar
Gene (Uniprot):osk
Chain IDs:B (auth: A), C
Chain Length:107
Number of Molecules:2
Biological Source:Drosophila melanogaster
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP-dependent RNA helicase vasa, isoform A
Gene (Uniprot):vas
Chain IDs:A (auth: B), D
Chain Length:163
Number of Molecules:2
Biological Source:Drosophila melanogaster
Primary Citation
The LOTUS domain is a conserved DEAD-box RNA helicase regulator essential for the recruitment of Vasa to the germ plasm and nuage.
Genes Dev. 31 939 952 (2017)
PMID: 28536148 DOI: 10.1101/gad.297051.117

Abstact

DEAD-box RNA helicases play important roles in a wide range of metabolic processes. Regulatory proteins can stimulate or block the activity of DEAD-box helicases. Here, we show that LOTUS (Limkain, Oskar, and Tudor containing proteins 5 and 7) domains present in the germline proteins Oskar, TDRD5 (Tudor domain-containing 5), and TDRD7 bind and stimulate the germline-specific DEAD-box RNA helicase Vasa. Our crystal structure of the LOTUS domain of Oskar in complex with the C-terminal RecA-like domain of Vasa reveals that the LOTUS domain occupies a surface on a DEAD-box helicase not implicated previously in the regulation of the enzyme's activity. We show that, in vivo, the localization of Drosophila Vasa to the nuage and germ plasm depends on its interaction with LOTUS domain proteins. The binding and stimulation of Vasa DEAD-box helicases by LOTUS domains are widely conserved.

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