5NNW image
Deposition Date 2017-04-10
Release Date 2017-12-27
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5NNW
Keywords:
Title:
NLPPya in complex with glucosamine
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.54 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:25 kDa protein elicitor
Gene (Uniprot):SD21-1
Chain IDs:A, B, C, D
Chain Length:219
Number of Molecules:4
Biological Source:Pythium aphanidermatum
Primary Citation

Abstact

Necrosis and ethylene-inducing peptide 1-like (NLP) proteins constitute a superfamily of proteins produced by plant pathogenic bacteria, fungi, and oomycetes. Many NLPs are cytotoxins that facilitate microbial infection of eudicot, but not of monocot plants. Here, we report glycosylinositol phosphorylceramide (GIPC) sphingolipids as NLP toxin receptors. Plant mutants with altered GIPC composition were more resistant to NLP toxins. Binding studies and x-ray crystallography showed that NLPs form complexes with terminal monomeric hexose moieties of GIPCs that result in conformational changes within the toxin. Insensitivity to NLP cytolysins of monocot plants may be explained by the length of the GIPC head group and the architecture of the NLP sugar-binding site. We unveil early steps in NLP cytolysin action that determine plant clade-specific toxin selectivity.

Legend

Protein

Chemical

Disease

Primary Citation of related structures