5NLS image
Entry Detail
PDB ID:
5NLS
Keywords:
Title:
Auxiliary activity 9
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-04-04
Release Date:
2017-11-01
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Auxiliary activity 9
Chain IDs:A
Chain Length:235
Number of Molecules:1
Biological Source:Lentinus similis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HIC A HIS modified residue
Peptide-like Molecules
PRD_900016
Primary Citation
Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates.
Nat Commun 8 1064 1064 (2017)
PMID: 29057953 DOI: 10.1038/s41467-017-01247-3

Abstact

Lytic polysaccharide monooxygenases (LPMOs) are industrially important copper-dependent enzymes that oxidatively cleave polysaccharides. Here we present a functional and structural characterization of two closely related AA9-family LPMOs from Lentinus similis (LsAA9A) and Collariella virescens (CvAA9A). LsAA9A and CvAA9A cleave a range of polysaccharides, including cellulose, xyloglucan, mixed-linkage glucan and glucomannan. LsAA9A additionally cleaves isolated xylan substrates. The structures of CvAA9A and of LsAA9A bound to cellulosic and non-cellulosic oligosaccharides provide insight into the molecular determinants of their specificity. Spectroscopic measurements reveal differences in copper co-ordination upon the binding of xylan and glucans. LsAA9A activity is less sensitive to the reducing agent potential when cleaving xylan, suggesting that distinct catalytic mechanisms exist for xylan and glucan cleavage. Overall, these data show that AA9 LPMOs can display different apparent substrate specificities dependent upon both productive protein-carbohydrate interactions across a binding surface and also electronic considerations at the copper active site.

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Primary Citation of related structures