5NIY image
Deposition Date 2017-03-27
Release Date 2018-10-10
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5NIY
Title:
Signal recognition particle-docking protein FtsY
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Signal recognition particle-docking protein FtsY
Chain IDs:A
Chain Length:309
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
The Escherichia coli SRP Receptor Forms a Homodimer at the Membrane.
Structure 26 1440 1450.e5 (2018)
PMID: 30146170 DOI: 10.1016/j.str.2018.07.008

Abstact

The Escherichia coli signal recognition particle (SRP) receptor, FtsY, plays a fundamental role in co-translational targeting of membrane proteins via the SRP pathway. Efficient targeting relies on membrane interaction of FtsY and heterodimerization with the SRP protein Ffh, which is driven by detachment of α helix (αN1) in FtsY. Here we show that apart from the heterodimer, FtsY forms a nucleotide-dependent homodimer on the membrane, and upon αN1 removal also in solution. Homodimerization triggers reciprocal stimulation of GTP hydrolysis and occurs in vivo. Biochemical characterization together with integrative modeling suggests that the homodimer employs the same interface as the heterodimer. Structure determination of FtsY NG+1 with GMPPNP shows that a dimerization-induced conformational switch of the γ-phosphate is conserved in Escherichia coli, filling an important gap in SRP GTPase activation. Our findings add to the current understanding of SRP GTPases and may challenge previous studies that did not consider homodimerization of FtsY.

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Primary Citation of related structures