5NI7 image
Entry Detail
PDB ID:
5NI7
Keywords:
Title:
Ligand complex of RORg LBD
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-03-23
Release Date:
2018-08-22
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nuclear receptor ROR-gamma
Chain IDs:A
Chain Length:288
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:The tethered SRC2-2 peptide
Chain IDs:B (auth: C)
Chain Length:15
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Potent and Orally Bioavailable Inverse Agonists of ROR gamma t Resulting from Structure-Based Design.
J. Med. Chem. 61 7796 7813 (2018)
PMID: 30095900 DOI: 10.1021/acs.jmedchem.8b00783

Abstact

Retinoic acid receptor related orphan receptor γt (RORγt), has been identified as the master regulator of TH17-cell function and development, making it an attractive target for the treatment of autoimmune diseases by a small-molecule approach. Herein, we describe our investigations on a series of 4-aryl-thienyl acetamides, which were guided by insights from X-ray cocrystal structures. Efforts in targeting the cofactor-recruitment site from the 4-aryl group on the thiophene led to a series of potent binders with nanomolar activity in a primary human-TH17-cell assay. The observation of a DMSO molecule binding in a subpocket outside the LBD inspired the introduction of an acetamide into the benzylic position of these compounds. Hereby, a hydrogen-bond interaction of the introduced acetamide oxygen with the backbone amide of Glu379 was established. This greatly enhanced the cellular activity of previously weakly cell-active compounds. The best compounds combined potent inhibition of IL-17 release with favorable PK in rodents, with compound 32 representing a promising starting point for future investigations.

Legend

Protein

Chemical

Disease

Primary Citation of related structures