5NG5 image
Deposition Date 2017-03-16
Release Date 2017-04-19
Last Version Date 2025-04-09
Entry Detail
PDB ID:
5NG5
Title:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
6.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Multidrug efflux pump subunit AcrA
Gene (Uniprot):acrA
Chain IDs:A (auth: E), B (auth: D), C (auth: G), D (auth: H), E (auth: A), F (auth: B)
Chain Length:373
Number of Molecules:6
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein TolC
Gene (Uniprot):tolC
Chain IDs:G (auth: F), H (auth: I), I (auth: C)
Chain Length:493
Number of Molecules:3
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Multidrug efflux pump subunit AcrB
Gene (Uniprot):acrB
Chain IDs:J (auth: K), K (auth: L), O (auth: J)
Chain Length:1049
Number of Molecules:3
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Multidrug efflux pump accessory protein AcrZ
Gene (Uniprot):acrZ
Chain IDs:L (auth: M), M (auth: N), N (auth: O)
Chain Length:54
Number of Molecules:3
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife 6 ? ? (2017)
PMID: 28355133 DOI: 10.7554/eLife.24905

Abstact

Bacterial efflux pumps confer multidrug resistance by transporting diverse antibiotics from the cell. In Gram-negative bacteria, some of these pumps form multi-protein assemblies that span the cell envelope. Here, we report the near-atomic resolution cryoEM structures of the Escherichia coli AcrAB-TolC multidrug efflux pump in resting and drug transport states, revealing a quaternary structural switch that allosterically couples and synchronizes initial ligand binding with channel opening. Within the transport-activated state, the channel remains open even though the pump cycles through three distinct conformations. Collectively, our data provide a dynamic mechanism for the assembly and operation of the AcrAB-TolC pump.

Legend

Protein

Chemical

Disease

Primary Citation of related structures