5NDT image
Deposition Date 2017-03-09
Release Date 2018-05-16
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5NDT
Keywords:
TRANSFERASE
Title:
Crystal structure of human Pim-1 kinase in complex with a consensus peptide and fragment like molecule (E)-3-(2-(thiophen-2-yl)vinyl)-3,4-dihydroquinoxalin-2(1H)-one
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.99 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 65
5NDT validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein kinase pim-1
Gene (Uniprot):PIM1
Mutagens:R250G
Chain IDs:A
Chain Length:313
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P11309 Pfam ID:PF00069 EC:2.7.11.1
Polymer Type:polypeptide(L)
Molecule:Pimtide
Chain IDs:B
Chain Length:14
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
8UB
GOL
Primary Citation
A crystallographic fragment study with human Pim-1 kinase
to be published ? ? ? (?)
Primary Citation of related structures
5NDT