5ND3 image
Deposition Date 2017-03-07
Release Date 2017-10-04
Last Version Date 2025-10-01
Entry Detail
PDB ID:
5ND3
Keywords:
Title:
Microtubule-bound MKLP2 motor domain in the with no nucleotide
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
6.10 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha chain
Chain IDs:B (auth: A)
Chain Length:451
Number of Molecules:1
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin beta-2B chain
Gene (Uniprot):TUBB2B
Chain IDs:C (auth: B)
Chain Length:445
Number of Molecules:1
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Kinesin-like protein KIF20A
Gene (Uniprot):Kif20a
Chain IDs:A (auth: C)
Chain Length:501
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
The divergent mitotic kinesin MKLP2 exhibits atypical structure and mechanochemistry.
Elife 6 ? ? (2017)
PMID: 28826477 DOI: 10.7554/eLife.27793

Abstact

MKLP2, a kinesin-6, has critical roles during the metaphase-anaphase transition and cytokinesis. Its motor domain contains conserved nucleotide binding motifs, but is divergent in sequence (~35% identity) and size (~40% larger) compared to other kinesins. Using cryo-electron microscopy and biophysical assays, we have undertaken a mechanochemical dissection of the microtubule-bound MKLP2 motor domain during its ATPase cycle, and show that many facets of its mechanism are distinct from other kinesins. While the MKLP2 neck-linker is directed towards the microtubule plus-end in an ATP-like state, it does not fully dock along the motor domain. Furthermore, the footprint of the MKLP2 motor domain on the MT surface is altered compared to motile kinesins, and enhanced by kinesin-6-specific sequences. The conformation of the highly extended loop6 insertion characteristic of kinesin-6s is nucleotide-independent and does not contact the MT surface. Our results emphasize the role of family-specific insertions in modulating kinesin motor function.

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Primary Citation of related structures