5NCE image
Deposition Date 2017-03-03
Release Date 2017-06-07
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5NCE
Keywords:
Title:
Structure of PsDef1 defensin from Pinus sylvestris
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Submitted:
15
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Defensin-1
Gene (Uniprot):Def1
Chain IDs:A
Chain Length:50
Number of Molecules:1
Biological Source:Pinus sylvestris
Ligand Molecules
Primary Citation
NMR structure, conformational dynamics, and biological activity of PsDef1 defensin from Pinus sylvestris.
Biochim. Biophys. Acta 1865 1085 1094 (2017)
PMID: 28528214 DOI: 10.1016/j.bbapap.2017.05.012

Abstact

Plants have developed a complex defense response system against pests and pathogens. Defensins, produced by plants as part of their innate immune response, form the family of small, basic, cysteine-rich proteins with activity primarily directed against fungal pathogens. In addition, plant defensins can show antibacterial activity and protease and insect amylase inhibitory activities. However, in gymnosperms, only antifungal activity of defensins has been described thus far. Here, we report antibacterial and insect α-amylase inhibition activities for defensin PsDef1 from P. sylvestris, the first defensin from gymnosperms with a broad range of biological activities described. We also report the solution NMR structure of PsDef1 and its dynamics properties assessed by a combination of experimental NMR and computational techniques. Collectively, our data provide an insight into structure, dynamics, and functional properties of PsDef1 that could be common between defensins from this taxonomic group.

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Primary Citation of related structures