5NC5 image
Deposition Date 2017-03-03
Release Date 2017-04-12
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5NC5
Title:
Crystal structure of AcrBZ in complex with antibiotic puromycin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Multidrug efflux pump subunit AcrB
Gene (Uniprot):acrB
Chain IDs:A, B, C
Chain Length:1049
Number of Molecules:3
Biological Source:Escherichia coli K-12
Polymer Type:polypeptide(L)
Molecule:DARPin
Chain IDs:D, E
Chain Length:169
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Multidrug efflux pump accessory protein AcrZ
Gene (Uniprot):acrZ
Chain IDs:F, G, H
Chain Length:49
Number of Molecules:3
Biological Source:Escherichia coli O157:H7
Primary Citation
An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife 6 ? ? (2017)
PMID: 28355133 DOI: 10.7554/eLife.24905

Abstact

Bacterial efflux pumps confer multidrug resistance by transporting diverse antibiotics from the cell. In Gram-negative bacteria, some of these pumps form multi-protein assemblies that span the cell envelope. Here, we report the near-atomic resolution cryoEM structures of the Escherichia coli AcrAB-TolC multidrug efflux pump in resting and drug transport states, revealing a quaternary structural switch that allosterically couples and synchronizes initial ligand binding with channel opening. Within the transport-activated state, the channel remains open even though the pump cycles through three distinct conformations. Collectively, our data provide a dynamic mechanism for the assembly and operation of the AcrAB-TolC pump.

Legend

Protein

Chemical

Disease

Primary Citation of related structures