5NAM image
Deposition Date 2017-02-28
Release Date 2017-09-06
Last Version Date 2024-06-19
Entry Detail
PDB ID:
5NAM
Title:
NMR structure of TLR4 transmembrane domain (624-670) in DMPG/DHPC bicelles
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Toll-like receptor 4
Gene (Uniprot):TLR4
Chain IDs:A
Chain Length:48
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Spatial structure of TLR4 transmembrane domain in bicelles provides the insight into the receptor activation mechanism.
Sci Rep 7 6864 6864 (2017)
PMID: 28761155 DOI: 10.1038/s41598-017-07250-4

Abstact

Toll-like receptors (TLRs) play a key role in the innate and adaptive immune systems. While a lot of structural data is available for the extracellular and cytoplasmic domains of TLRs, and a model of the dimeric full-length TLR3 receptor in the active state was build, the conformation of the transmembrane (TM) domain and juxtamembrane regions in TLR dimers is still unclear. In the present work, we study the transmembrane and juxtamembrane parts of human TLR4 receptor using solution NMR spectroscopy in a variety of membrane mimetics, including phospholipid bicelles. We show that the juxtamembrane hydrophobic region of TLR4 includes a part of long TM α-helix. We report the dimerization interface of the TM domain and claim that long TM domains with transmembrane charged aminoacids is a common feature of human toll-like receptors. This fact is analyzed from the viewpoint of protein activation mechanism, and a model of full-length TLR4 receptor in the dimeric state has been proposed.

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Primary Citation of related structures