5NAF image
Deposition Date 2017-02-27
Release Date 2017-03-29
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5NAF
Keywords:
Title:
Co-crystal structure of an MeCP2 peptide with TBLR1 WD40 domain
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.49 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:F-box-like/WD repeat-containing protein TBL1XR1
Gene (Uniprot):Tbl1xr1
Chain IDs:A, B, C, D
Chain Length:402
Number of Molecules:4
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Methyl-CpG-binding protein 2
Gene (Uniprot):Mecp2
Chain IDs:E, F
Chain Length:25
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structure of the MeCP2-TBLR1 complex reveals a molecular basis for Rett syndrome and related disorders.
Proc. Natl. Acad. Sci. U.S.A. 114 E3243 E3250 (2017)
PMID: 28348241 DOI: 10.1073/pnas.1700731114

Abstact

Rett syndrome (RTT) is an X-linked neurological disorder caused by mutations in the methyl-CpG-binding protein 2 (MeCP2) gene. The majority of RTT missense mutations disrupt the interaction of the MeCP2 with DNA or the nuclear receptor corepressor (NCoR)/silencing mediator of retinoic acid and thyroid receptors (SMRT) corepressor complex. Here, we show that the "NCoR/SMRT interaction domain" (NID) of MeCP2 directly contacts transducin beta-like 1 (TBL1) and TBL1 related (TBLR1), two paralogs that are core components of NCoR/SMRT. We determine the cocrystal structure of the MeCP2 NID in complex with the WD40 domain of TBLR1 and confirm by in vitro and ex vivo assays that mutation of interacting residues of TBLR1 and TBL1 disrupts binding to MeCP2. Strikingly, the four MeCP2-NID residues mutated in RTT are those residues that make the most extensive contacts with TBLR1. Moreover, missense mutations in the gene for TBLR1 that are associated with intellectual disability also prevent MeCP2 binding. Our study therefore reveals the molecular basis of an interaction that is crucial for optimal brain function.

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Chemical

Disease

Primary Citation of related structures