5N8O image
Deposition Date 2017-02-23
Release Date 2017-05-03
Last Version Date 2024-05-15
Entry Detail
PDB ID:
5N8O
Keywords:
Title:
Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA helicase I
Gene (Uniprot):traI
Chain IDs:A
Chain Length:1756
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3')
Chain IDs:B (auth: C)
Chain Length:22
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Cryo-EM Structure of a Relaxase Reveals the Molecular Basis of DNA Unwinding during Bacterial Conjugation
Cell 169 708 721.e12 (2017)
PMID: 28457609 DOI: 10.1016/j.cell.2017.04.010

Abstact

Relaxases play essential roles in conjugation, the main process by which bacteria exchange genetic material, notably antibiotic resistance genes. They are bifunctional enzymes containing a trans-esterase activity, which is responsible for nicking the DNA strand to be transferred and for covalent attachment to the resulting 5'-phosphate end, and a helicase activity, which is responsible for unwinding the DNA while it is being transported to a recipient cell. Here we show that these two activities are carried out by two conformers that can both load simultaneously on the origin of transfer DNA. We solve the structure of one of these conformers by cryo electron microscopy to near-atomic resolution, elucidating the molecular basis of helicase function by relaxases and revealing insights into the mechanistic events taking place in the cell prior to substrate transport during conjugation.

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Primary Citation of related structures