5N6M image
Deposition Date 2017-02-15
Release Date 2017-07-12
Last Version Date 2024-01-17
Entry Detail
PDB ID:
5N6M
Title:
Structure of the membrane integral lipoprotein N-acyltransferase Lnt from P. aeruginosa
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Apolipoprotein N-acyltransferase
Gene (Uniprot):lnt
Chain IDs:A
Chain Length:531
Number of Molecules:1
Biological Source:Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Primary Citation
Structural insights into the mechanism of the membrane integral N-acyltransferase step in bacterial lipoprotein synthesis.
Nat Commun 8 15952 15952 (2017)
PMID: 28675161 DOI: 10.1038/ncomms15952

Abstact

Lipoproteins serve essential roles in the bacterial cell envelope. The posttranslational modification pathway leading to lipoprotein synthesis involves three enzymes. All are potential targets for the development of new antibiotics. Here we report the crystal structure of the last enzyme in the pathway, apolipoprotein N-acyltransferase, Lnt, responsible for adding a third acyl chain to the lipoprotein's invariant diacylated N-terminal cysteine. Structures of Lnt from Pseudomonas aeruginosa and Escherichia coli have been solved; they are remarkably similar. Both consist of a membrane domain on which sits a globular periplasmic domain. The active site resides above the membrane interface where the domains meet facing into the periplasm. The structures are consistent with the proposed ping-pong reaction mechanism and suggest plausible routes by which substrates and products enter and leave the active site. While Lnt may present challenges for antibiotic development, the structures described should facilitate design of therapeutics with reduced off-target effects.

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