5MZZ image
Entry Detail
PDB ID:
5MZZ
Keywords:
Title:
Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2017-02-02
Release Date:
2017-05-31
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glutaconate CoA-transferase family, subunit A
Mutations:K191A
Chain IDs:A, B (auth: C)
Chain Length:265
Number of Molecules:2
Biological Source:Myxococcus xanthus (strain DK 1622)
Polymer Type:polypeptide(L)
Description:Glutaconate CoA-transferase family, subunit B
Mutations:E200A, E201A
Chain IDs:C (auth: D), D (auth: B)
Chain Length:248
Number of Molecules:2
Biological Source:Myxococcus xanthus (strain DK 1622)
Primary Citation
AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl. 56 9986 9989 (2017)
PMID: 28508504 DOI: 10.1002/anie.201701992

Abstact

Isovaleryl coenzyme A (IV-CoA) is an important precursor for iso-fatty acids and lipids. It acts in the development of myxobacteria, which can produce this compound from acetyl-CoA through alternative IV-CoA biosynthesis (aib). A central reaction of aib is catalyzed by AibA/AibB, which acts as a cofactor-free decarboxylase despite belonging to the family of CoA-transferases. We developed an efficient expression system for AibA/AibB that allowed the determination of high-resolution crystal structures in complex with different ligands. Through mutational studies, we show that an active-site cysteine previously proposed to be involved in decarboxylation is not required for activity. Instead, AibA/AibB seems to induce an intramolecular decarboxylation by binding its substrate in a hydrophobic cavity and forcing it into a bent conformation. Our study opens opportunities for synthetic biology studies, since AibA/AibB may be suitable for the production of isobutene, a precursor of biofuels and chemicals.

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