5MZA image
Deposition Date 2017-01-31
Release Date 2017-03-22
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5MZA
Keywords:
Title:
The DBLb domain of PF11_0521 PfEMP1 bound to human ICAM-1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.78 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Erythrocyte membrane protein 1 (PfEMP1)
Gene (Uniprot):PF3D7_1150400
Chain IDs:A
Chain Length:488
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Intercellular adhesion molecule 1
Gene (Uniprot):ICAM1
Chain IDs:B
Chain Length:186
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structure-Guided Identification of a Family of Dual Receptor-Binding PfEMP1 that Is Associated with Cerebral Malaria.
Cell Host Microbe 21 403 414 (2017)
PMID: 28279348 DOI: 10.1016/j.chom.2017.02.009

Abstact

Cerebral malaria is a deadly outcome of infection by Plasmodium falciparum, occurring when parasite-infected erythrocytes accumulate in the brain. These erythrocytes display parasite proteins of the PfEMP1 family that bind various endothelial receptors. Despite the importance of cerebral malaria, a binding phenotype linked to its symptoms has not been identified. Here, we used structural biology to determine how a group of PfEMP1 proteins interacts with intercellular adhesion molecule 1 (ICAM-1), allowing us to predict binders from a specific sequence motif alone. Analysis of multiple Plasmodium falciparum genomes showed that ICAM-1-binding PfEMP1s also interact with endothelial protein C receptor (EPCR), allowing infected erythrocytes to synergistically bind both receptors. Expression of these PfEMP1s, predicted to bind both ICAM-1 and EPCR, is associated with increased risk of developing cerebral malaria. This study therefore reveals an important PfEMP1-binding phenotype that could be targeted as part of a strategy to prevent cerebral malaria.

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Primary Citation of related structures