5MXN image
Deposition Date 2017-01-23
Release Date 2017-08-02
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5MXN
Title:
Atomic model of the VipA/VipB/Hcp, the type six secretion system non-contractile sheath-tube of Vibrio cholerae from cryo-EM
Biological Source:
Source Organism:
Vibrio cholerae (Taxon ID: 666)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Haemolysin co-regulated protein
Gene (Uniprot):hcp
Chain IDs:A (auth: 1), D (auth: 2), G (auth: 3), J (auth: 4), M (auth: 5), P (auth: 6)
Chain Length:170
Number of Molecules:6
Biological Source:Vibrio cholerae
Polymer Type:polypeptide(L)
Molecule:Type VI secretion protein
Chain IDs:B (auth: A), E (auth: B), H (auth: C), K (auth: D), N (auth: E), Q (auth: F)
Chain Length:159
Number of Molecules:6
Biological Source:Vibrio cholerae
Polymer Type:polypeptide(L)
Molecule:Type VI secretion protein
Chain IDs:C (auth: a), F (auth: b), I (auth: c), L (auth: d), O (auth: e), R (auth: f)
Chain Length:159
Number of Molecules:6
Biological Source:Vibrio cholerae
Ligand Molecules
Primary Citation
Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol 2 1507 1512 (2017)
PMID: 28947741 DOI: 10.1038/s41564-017-0020-7

Abstact

The bacterial type VI secretion system (T6SS) uses contraction of a long sheath to quickly thrust a tube with associated effectors across membranes of eukaryotic and bacterial cells 1-5 . Only limited structural information is available about the inherently unstable precontraction state of the T6SS. Here, we obtain a 3.7 Å resolution structure of a non-contractile sheath-tube complex using cryo-electron microscopy and show that it resembles the extended T6SS inside Vibrio cholerae cells. We build a pseudo-atomic model of the complete sheath-tube assembly, which provides a mechanistic understanding of coupling sheath contraction with pushing and rotating the inner tube for efficient target membrane penetration. Our data further show that sheath contraction exposes a buried recognition domain to specifically trigger the disassembly and recycling of the T6SS sheath by the cognate ATP-dependent unfoldase ClpV.

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Primary Citation of related structures