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Entry Detail
PDB ID:
5MVB
Keywords:
Title:
Solution structure of a human G-Quadruplex hybrid-2 form in complex with a Gold-ligand.
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2017-01-16
Release Date:
2017-05-31
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Description:DNA (26-MER)
Chain IDs:A
Chain Length:26
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Solution NMR Structure of a Ligand/Hybrid-2-G-Quadruplex Complex Reveals Rearrangements that Affect Ligand Binding.
Angew. Chem. Int. Ed. Engl. 56 7102 7106 (2017)
PMID: 28524432 DOI: 10.1002/anie.201702135

Abstact

Telomeric G-quadruplexes have recently emerged as drug targets in cancer research. Herein, we present the first NMR structure of a telomeric DNA G-quadruplex that adopts the biologically relevant hybrid-2 conformation in a ligand-bound state. We solved the complex with a metalorganic gold(III) ligand that stabilizes G-quadruplexes. Analysis of the free and bound structures reveals structural changes in the capping region of the G-quadruplex. The ligand is sandwiched between one terminal G-tetrad and a flanking nucleotide. This complex structure involves a major structural rearrangement compared to the free G-quadruplex structure as observed for other G-quadruplexes in different conformations, invalidating simple docking approaches to ligand-G-quadruplex structure determination.

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