5MKR image
Deposition Date 2016-12-05
Release Date 2017-03-01
Last Version Date 2024-05-01
Entry Detail
PDB ID:
5MKR
Keywords:
Title:
HSP72-NBD bound to compound TCI 8 - Tyr15 in up-conformation
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.22
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Heat shock 70 kDa protein 1A
Gene (Uniprot):HSPA1A
Chain IDs:A
Chain Length:394
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
An Irreversible Inhibitor of HSP72 that Unexpectedly Targets Lysine-56.
Angew. Chem. Int. Ed. Engl. 56 3536 3540 (2017)
PMID: 28225177 DOI: 10.1002/anie.201611907

Abstact

The stress-inducible molecular chaperone, HSP72, is an important therapeutic target in oncology, but inhibiting this protein with small molecules has proven particularly challenging. Validating HSP72 inhibitors in cells is difficult owing to competition with the high affinity and abundance of its endogenous nucleotide substrates. We hypothesized this could be overcome using a cysteine-targeted irreversible inhibitor. Using rational design, we adapted a validated 8-N-benzyladenosine ligand for covalent bond formation and confirmed targeted irreversible inhibition. However, no cysteine in the protein was modified; instead, we demonstrate that lysine-56 is the key nucleophilic residue. Targeting this lysine could lead to a new design paradigm for HSP72 chemical probes and drugs.

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