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Entry Detail
PDB ID:
5MDM
Keywords:
Title:
Structural intermediates in the fusion associated transition of vesiculovirus glycoprotein
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2016-11-11
Release Date:
2016-12-14
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glycoprotein
Chain IDs:A (auth: E), B (auth: F), C (auth: A), D (auth: C)
Chain Length:419
Number of Molecules:4
Biological Source:Chandipura virus
Primary Citation
Structural intermediates in the fusion-associated transition of vesiculovirus glycoprotein.
EMBO J. 36 679 692 (2017)
PMID: 28188244 DOI: 10.15252/embj.201694565

Abstact

Vesiculoviruses enter cells by membrane fusion, driven by a large, low-pH-induced, conformational change in the fusion glycoprotein G that involves transition from a trimeric pre-fusion toward a trimeric post-fusion state via monomeric intermediates. Here, we present the structure of the G fusion protein at intermediate pH for two vesiculoviruses, vesicular stomatitis virus (VSV) and Chandipura virus (CHAV), which is responsible for deadly encephalopathies. First, a CHAV G crystal structure shows two intermediate conformations forming a flat dimer of heterodimers. On virions, electron microscopy (EM) and tomography reveal monomeric spikes similar to one of the crystal conformations. In solution, mass spectrometry shows dimers of G. Finally, mutations at a dimer interface, involving fusion domains associated in an antiparallel manner to form an intermolecular β-sheet, affect G fusion properties. The location of the compensatory mutations restoring fusion activity strongly suggests that this interface is functionally relevant. This work reveals the range of G structural changes and suggests that G monomers can re-associate, through antiparallel interactions between fusion domains, into dimers that play a role at some early stage of the fusion process.

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